- Predicted Gene MLOC_54108
MLOC_54108 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54108_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54108_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.47975 | 6.95734 | 5.647 | 5.91108 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.95819 | 2.09984 | 3.27341 | 2.70405 |
INF1 | Young developing inflorescences (5mm) | 9.16302 | 9.43967 | 9.14067 | 7.70583 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.77331 | 8.30122 | 8.60905 | 9.21689 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.25036 | 5.15033 | 4.40716 | 5.65145 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.67461 | 2.30212 | 2.86798 | 7.89083 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.74345 | 7.06362 | 6.36706 | 6.41209 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.87129 | 2.95712 | 2.54618 | 6.45795 |
CDS Structure of MLOC_54108
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54108.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g19940.1 |
+1 |
0.0 |
1040 |
496/594 (84%) |
13109.m01880 protein cwfJ-like family protein, putative, expressed |
TAIR PP10 |
AT5G56900.2 |
+1 |
0.0 |
701 |
346/599 (58%) |
CwfJ-like family protein / zinc finger (CCCH-type) family protein | chr5:23019750-23022670 REVERSE LENGTH=596 |