MLOC_54107 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.3038440.2925790.1519090.181777
INF2Developing inflorescences (1-1.5 cm)0.4092440.1646130.2525660.264906
ROORoots from the seedlings (10 cm shoot stage)00.16870800.390625
NODDeveloping tillers at six leaf stage, 3rd internode00.05033180.01661480.202642
CAR5Developing grain, bracts removed (5 DPA)0.10686600.2496010.143862
CAR15Developing grain, bracts removed (15 DPA)0.3303050.2621630.09760940.501391



CDS Structure of MLOC_54107






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54107.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54107.1CUST_13165_PI427708080AvailableAvailablecontig_38897 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g06100.1 +2 3e-24 100 47/108 (44%) 13102.m00671 protein conserved hypothetical protein
TAIR PP10None-----