MLOC_54106 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.017119.268919.251117.4272
LEAShoots from the seedlings (10 cm shoot stage)22.097316.75717.957117.5395
INF1Young developing inflorescences (5mm)44.619944.658145.238938.0233
INF2Developing inflorescences (1-1.5 cm)56.222152.103350.923358.5823
ROORoots from the seedlings (10 cm shoot stage)6.4489712.96559.4562715.2036
NODDeveloping tillers at six leaf stage, 3rd internode9.9580312.490415.737546.6325
CAR5Developing grain, bracts removed (5 DPA)37.155936.859239.272836.9759
CAR15Developing grain, bracts removed (15 DPA)34.233531.883931.107574.061



CDS Structure of MLOC_54106






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356860
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356860CUST_19727_PI427708080NoneNoneNone
MLOC_32027.1NoneAvailableNonecontig_224520 (Not mapped)
MLOC_54106.2NoneAvailableAvailablecontig_38896 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----