- Predicted Gene MLOC_54083
MLOC_54083 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.0452 | 29.2829 | 26.4683 | 18.5628 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.23752 | 0.293279 | 0.779868 | 1.25181 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0938504 | 0.434528 | 0.301769 | 0.306188 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.435496 | 0.47169 | 0.38336 | 1.07683 |
CDS Structure of MLOC_54083
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54083.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g32930.1 |
+2 |
6e-70 |
221 |
131/229 (57%) |
13108.m03423 protein expressed protein |
| TAIR PP10 |
AT4G04330.1 |
+2 |
8e-47 |
159 |
87/171 (51%) |
Chaperonin-like RbcX protein | chr4:2116700-2118563 REVERSE LENGTH=174 |