MLOC_54082 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5702391.416931.28230.824964
LEAShoots from the seedlings (10 cm shoot stage)2.487752.469592.807621.62635
INF1Young developing inflorescences (5mm)3.119324.25274.145912.8485
INF2Developing inflorescences (1-1.5 cm)7.33467.304166.215586.82675
ROORoots from the seedlings (10 cm shoot stage)2.690972.835683.8382.64051
NODDeveloping tillers at six leaf stage, 3rd internode3.540313.222314.787899.12492
CAR5Developing grain, bracts removed (5 DPA)7.945997.036396.183726.16738
CAR15Developing grain, bracts removed (15 DPA)3.191452.751983.333676.87024



CDS Structure of MLOC_54082






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54082.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54082.1CUST_5002_PI427708086AvailableAvailablecontig_38869 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----