- Predicted Gene MLOC_54048
MLOC_54048 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.577515 | 0.677724 | 0.807487 | 0.641273 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.21103 | 0.174383 | 0.0791379 | 0.10543 |
| INF1 | Young developing inflorescences (5mm) | 1.62609 | 2.21189 | 2.40137 | 1.43182 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.48762 | 3.09455 | 2.80024 | 2.96991 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.522541 | 0.832969 | 0.635464 | 0.760509 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.394902 | 0.427281 | 0.848317 | 1.4542 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.840363 | 1.15184 | 0.803269 | 0.7918 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.192757 | 0.00208773 | 0.258308 | 0.286565 |
CDS Structure of MLOC_54048
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54048.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g14270.1 |
+2 |
4e-127 |
217 |
117/235 (50%) |
13111.m01462 protein transposon protein, putative, unclassified |
| TAIR PP10 |
AT1G19260.1 |
+1 |
2e-73 |
156 |
83/171 (49%) |
TTF-type zinc finger protein with HAT dimerisation domain | chr1:6657260-6659569 REVERSE LENGTH=769 |