MLOC_54045 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.4126517.406614.84215.3568
LEAShoots from the seedlings (10 cm shoot stage)15.143115.157413.722113.5457
INF1Young developing inflorescences (5mm)33.033931.199534.976628.7762
INF2Developing inflorescences (1-1.5 cm)48.074545.630343.755851.9467
ROORoots from the seedlings (10 cm shoot stage)7.1404317.538412.598520.6893
NODDeveloping tillers at six leaf stage, 3rd internode8.941149.7253510.993536.3516
CAR5Developing grain, bracts removed (5 DPA)24.313122.01523.749923.65
CAR15Developing grain, bracts removed (15 DPA)26.736426.120224.829160.8635



CDS Structure of MLOC_54045






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54045.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54045.5CUST_17739_PI427708080AvailableAvailablecontig_38837 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g03360.1 +3 1e-124 390 333/480 (69%) 13108.m00293 protein ATBET9, putative, expressed
TAIR PP10 AT5G14270.1 +3 2e-79 274 292/746 (39%) | Symbols: ATBET9, BET9 | bromodomain and extraterminal domain protein 9 | chr5:4605173-4608517 FORWARD LENGTH=688