- Predicted Gene MLOC_54045
MLOC_54045 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.41265 | 17.4066 | 14.842 | 15.3568 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.1431 | 15.1574 | 13.7221 | 13.5457 |
INF1 | Young developing inflorescences (5mm) | 33.0339 | 31.1995 | 34.9766 | 28.7762 |
INF2 | Developing inflorescences (1-1.5 cm) | 48.0745 | 45.6303 | 43.7558 | 51.9467 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.14043 | 17.5384 | 12.5985 | 20.6893 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.94114 | 9.72535 | 10.9935 | 36.3516 |
CAR5 | Developing grain, bracts removed (5 DPA) | 24.3131 | 22.015 | 23.7499 | 23.65 |
CAR15 | Developing grain, bracts removed (15 DPA) | 26.7364 | 26.1202 | 24.8291 | 60.8635 |
CDS Structure of MLOC_54045
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54045.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g03360.1 |
+3 |
1e-124 |
390 |
333/480 (69%) |
13108.m00293 protein ATBET9, putative, expressed |
TAIR PP10 |
AT5G14270.1 |
+3 |
2e-79 |
274 |
292/746 (39%) |
| Symbols: ATBET9, BET9 | bromodomain and extraterminal domain protein 9 | chr5:4605173-4608517 FORWARD LENGTH=688 |