MLOC_5404 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.58227 | 2.3987 | 2.21595 | 2.68973 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0.0237351 | 0 | 0 | 0.0218644 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.6809 | 8.37775 | 10.2507 | 10.7634 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0292224 | 0.0273141 | 0 | 0.0315275 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_5404
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5404.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g36600.1 |
-1 |
3e-159 |
463 |
234/344 (68%) |
13102.m03996 protein aldose 1-epimerase, putative, expressed |
| TAIR PP10 |
AT5G15140.1 |
-1 |
7e-117 |
357 |
175/332 (53%) |
Galactose mutarotase-like superfamily protein | chr5:4908686-4910670 FORWARD LENGTH=490 |
