- Predicted Gene MLOC_54038
MLOC_54038 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54038_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54038_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.30867 | 4.92516 | 5.72917 | 4.949 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.45339 | 2.59447 | 2.77833 | 2.29998 |
INF1 | Young developing inflorescences (5mm) | 6.32359 | 6.47894 | 6.29567 | 5.05495 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.18081 | 4.93567 | 5.06881 | 4.6792 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.94562 | 4.15619 | 5.81682 | 4.66269 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.18789 | 4.67539 | 4.88775 | 12.3589 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.37646 | 4.90868 | 3.97433 | 3.95443 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.29992 | 0.824949 | 1.09928 | 2.43525 |
CDS Structure of MLOC_54038
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54038.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g49710.1 |
-3 |
1e-51 |
174 |
97/155 (63%) |
13103.m05402 protein ribosomal protein S13p/S18e, putative, expressed |
TAIR PP10 |
AT5G14320.1 |
-3 |
3e-42 |
149 |
70/116 (60%) |
Ribosomal protein S13/S18 family | chr5:4617839-4618772 REVERSE LENGTH=169 |