- Predicted Gene MLOC_54031
MLOC_54031 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54031_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54031_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 528.408 | 516.604 | 602.694 | 596.279 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.9266 | 33.1078 | 4.35976 | 14.6428 |
INF1 | Young developing inflorescences (5mm) | 30.5286 | 38.9991 | 37.3831 | 35.3477 |
INF2 | Developing inflorescences (1-1.5 cm) | 65.7728 | 49.0927 | 67.7692 | 73.1768 |
ROO | Roots from the seedlings (10 cm shoot stage) | 472.626 | 389.911 | 316.338 | 477.337 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.55155 | 2.50463 | 1.37926 | 6.45411 |
CAR5 | Developing grain, bracts removed (5 DPA) | 351.662 | 350.864 | 374.291 | 401.233 |
CAR15 | Developing grain, bracts removed (15 DPA) | 55.1938 | 28.0581 | 56.7721 | 120.127 |
CDS Structure of MLOC_54031
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54031.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52860.1 |
-3 |
0.0 |
1353 |
651/868 (75%) |
13103.m05766 protein lipoxygenase, putative, expressed |
TAIR PP10 |
AT1G55020.1 |
-3 |
0.0 |
964 |
483/867 (56%) |
| Symbols: LOX1, ATLOX1 | lipoxygenase 1 | chr1:20525798-20530143 FORWARD LENGTH=859 |