- Predicted Gene MLOC_54014
MLOC_54014 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 37.3584 | 39.0048 | 42.2647 | 35.0282 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 49.5139 | 35.6929 | 42.4019 | 33.8023 |
| INF1 | Young developing inflorescences (5mm) | 42.7466 | 39.1678 | 37.4806 | 29.6916 |
| INF2 | Developing inflorescences (1-1.5 cm) | 33.5051 | 35.3025 | 38.6089 | 33.9589 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 34.0305 | 42.2392 | 42.2105 | 43.8259 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 47.2681 | 40.0452 | 52.1005 | 131.039 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 57.243 | 54.1647 | 56.6235 | 47.0271 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 23.4771 | 20.8625 | 22.1114 | 43.6316 |
CDS Structure of MLOC_54014
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54014.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g34730.1 |
+3 |
0.0 |
679 |
331/360 (92%) |
13107.m03549 protein acyltransferase, putative, expressed |
| TAIR PP10 |
AT5G60620.1 |
+3 |
0.0 |
580 |
278/359 (77%) |
| Symbols: GPAT9 | glycerol-3-phosphate acyltransferase 9 | chr5:24367266-24369647 FORWARD LENGTH=376 |
