- Predicted Gene MLOC_53997
MLOC_53997 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 39.0911 | 39.706 | 40.5673 | 40.0462 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.2992 | 16.7212 | 12.3835 | 13.9807 |
| INF1 | Young developing inflorescences (5mm) | 44.7848 | 45.1401 | 41.0962 | 36.1151 |
| INF2 | Developing inflorescences (1-1.5 cm) | 31.2356 | 32.7701 | 27.9985 | 34.3591 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.7606 | 25.2157 | 21.1983 | 29.0836 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.44679 | 2.74062 | 5.53001 | 11.4011 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.0038 | 27.7965 | 31.1373 | 28.582 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.75477 | 4.4534 | 4.67763 | 10.3753 |
CDS Structure of MLOC_53997
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53997.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g19930.1 |
+2 |
0.0 |
872 |
437/542 (81%) |
13103.m02388 protein adenylosuccinate lyase, putative, expressed |
| TAIR PP10 |
AT4G18440.1 |
+2 |
0.0 |
635 |
309/453 (68%) |
L-Aspartase-like family protein | chr4:10186385-10188832 REVERSE LENGTH=536 |