- Predicted Gene MLOC_53965
MLOC_53965 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53965_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53965_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.80255 | 5.73436 | 4.81242 | 4.97679 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.98423 | 2.5496 | 4.28604 | 2.78071 |
INF1 | Young developing inflorescences (5mm) | 3.5431 | 3.56232 | 3.24431 | 2.84989 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.91032 | 4.12349 | 3.41116 | 3.86429 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.87612 | 4.5917 | 4.132 | 5.29573 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.38676 | 2.06688 | 3.1784 | 7.51384 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.71678 | 3.13645 | 3.28964 | 2.96677 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.68811 | 0.507642 | 0.812096 | 1.4894 |
CDS Structure of MLOC_53965
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53965.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g07190.1 |
+1 |
0.0 |
794 |
405/508 (80%) |
13112.m00750 protein CBS domain-containing protein, putative, expressed |
TAIR PP10 |
AT3G52950.2 |
+1 |
0.0 |
640 |
340/521 (65%) |
CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein | chr3:19634866-19636536 FORWARD LENGTH=556 |