MLOC_53954 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.6569510.16166.05910
LEAShoots from the seedlings (10 cm shoot stage)7.873494.874124.954730
INF1Young developing inflorescences (5mm)23.363418.601819.57750
INF2Developing inflorescences (1-1.5 cm)18.463115.887615.48140
ROORoots from the seedlings (10 cm shoot stage)3.089078.882629.004010
NODDeveloping tillers at six leaf stage, 3rd internode0.6565031.030562.722460
CAR5Developing grain, bracts removed (5 DPA)7.154298.385098.476780
CAR15Developing grain, bracts removed (15 DPA)3.047414.068572.777350



CDS Structure of MLOC_53954






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374032
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374032CUST_22604_PI427708080NoneNoneNone
MLOC_2339.1NoneAvailableNonecontig_120799 (Mapped)
MLOC_49031.1NoneAvailableAvailablecontig_334178 (Mapped)
MLOC_53954.1NoneAvailableNonecontig_387730 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----