- Predicted Gene MLOC_53950
MLOC_53950 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53950_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53950_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 10.6341 | 10.2684 | 9.95668 | 11.0315 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.64469 | 1.05597 | 2.39607 | 2.07245 |
INF1 | Young developing inflorescences (5mm) | 1.05554 | 0.768327 | 0.487864 | 0.688204 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.12055 | 0.0952737 | 0.104503 | 0.122301 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.75783 | 9.94571 | 6.41771 | 10.9107 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.6645 | 14.4905 | 15.5067 | 44.5532 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.80678 | 1.39468 | 1.05318 | 1.42557 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.374936 | 0.418184 | 0.859658 | 1.21209 |
CDS Structure of MLOC_53950
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53950.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g33740.1 |
+2 |
0.0 |
828 |
401/487 (82%) |
13108.m03520 protein CSLA11 - cellulose synthase-like family A, expressed |
TAIR PP10 |
AT5G03760.1 |
+2 |
0.0 |
628 |
290/458 (63%) |
| Symbols: ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:985910-990087 REVERSE LENGTH=533 |