MLOC_53930 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.559991.094421.795111.44396
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.544330.4292370.4255520.787467
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)00.02425220.03065040.125911



CDS Structure of MLOC_53930






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53930.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369638NoneNoneNoneNone
MLOC_53930.1CUST_18099_PI427708080AvailableAvailablecontig_38752 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g50200.1 -1 0.0 624 332/482 (69%) 13101.m05225 protein UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
TAIR PP10 AT3G16520.3 -1 1e-109 339 196/469 (42%) | Symbols: UGT88A1 | UDP-glucosyl transferase 88A1 | chr3:5619355-5620833 REVERSE LENGTH=462