MLOC_53922 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains149.673178.092179.254168.4
LEAShoots from the seedlings (10 cm shoot stage)66.355737.003743.148940.6513
INF1Young developing inflorescences (5mm)53.584247.878645.698342.6773
INF2Developing inflorescences (1-1.5 cm)32.431737.580740.706341.1531
ROORoots from the seedlings (10 cm shoot stage)129.678155.54128.408173.253
NODDeveloping tillers at six leaf stage, 3rd internode55.121736.298636.4575112.111
CAR5Developing grain, bracts removed (5 DPA)63.54162.344862.48363.7791
CAR15Developing grain, bracts removed (15 DPA)9.801237.0452211.065322.3156



CDS Structure of MLOC_53922






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362112
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362112CUST_20488_PI427708080NoneNoneNone
MLOC_376.2NoneAvailableNonecontig_102629 (Mapped)
MLOC_49422.1NoneAvailableNonecontig_341365 (Mapped)
MLOC_53922.1NoneAvailableAvailablecontig_38742 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----