MLOC_5392 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.0772811.430112.515310.2356
LEAShoots from the seedlings (10 cm shoot stage)16.280210.957410.061810.3442
INF1Young developing inflorescences (5mm)31.721928.380528.232325.0702
INF2Developing inflorescences (1-1.5 cm)34.31329.313826.062732.7333
ROORoots from the seedlings (10 cm shoot stage)5.8545210.9589.5970911.4876
NODDeveloping tillers at six leaf stage, 3rd internode5.456826.052888.3003821.2947
CAR5Developing grain, bracts removed (5 DPA)15.855212.389914.15213.2134
CAR15Developing grain, bracts removed (15 DPA)8.921077.95279.1749519.7097



CDS Structure of MLOC_5392






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367129
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367129CUST_21415_PI427708080NoneNoneNone
MLOC_51610.1NoneAvailableNonecontig_36990 (Mapped)
MLOC_5392.1NoneAvailableAvailablecontig_136227 (Mapped)
MLOC_72261.2NoneAvailableNonecontig_613243 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----