MLOC_53902 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.71047.302058.679340
LEAShoots from the seedlings (10 cm shoot stage)5.646015.000378.92980
INF1Young developing inflorescences (5mm)13.605217.660423.55060
INF2Developing inflorescences (1-1.5 cm)18.10822.510517.09420
ROORoots from the seedlings (10 cm shoot stage)4.589815.657385.829340
NODDeveloping tillers at six leaf stage, 3rd internode6.1807714.701125.21510
CAR5Developing grain, bracts removed (5 DPA)7.015656.758099.983020
CAR15Developing grain, bracts removed (15 DPA)5.134278.172544.955860



CDS Structure of MLOC_53902






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252401.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252401.1CUST_19149_PI427708080NoneNoneNone
MLOC_38426.1NoneAvailableNonecontig_2550436 (Mapped)
MLOC_40485.1NoneAvailableNonecontig_2560181 (Mapped)
MLOC_53902.1NoneAvailableNonecontig_387268 (Not mapped)
MLOC_75600.1NoneAvailableAvailablecontig_68314 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----