- Predicted Gene MLOC_53883
MLOC_53883 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.44172 | 3.50639 | 2.34274 | 2.73489 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.81802 | 0.0653319 | 0.162548 | 0.325834 |
| INF1 | Young developing inflorescences (5mm) | 10.7003 | 10.7694 | 11.1973 | 9.14448 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.15464 | 10.817 | 9.91552 | 10.5635 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.691768 | 1.95972 | 1.63554 | 2.1622 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0292381 | 0.0100775 | 0.136097 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.02721 | 1.84942 | 2.30838 | 1.96688 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.645186 | 0.252116 | 0.379818 | 1.01493 |
CDS Structure of MLOC_53883
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53883.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g06900.1 |
+2 |
0.0 |
1305 |
658/850 (77%) |
13103.m00760 protein DNA topoisomerase 3 protein, putative, expressed |
| TAIR PP10 |
AT5G63920.1 |
+2 |
0.0 |
1184 |
590/900 (66%) |
| Symbols: TOP3A, AtTOP3alpha | topoisomerase 3alpha | chr5:25574533-25581230 FORWARD LENGTH=926 |