MLOC_53879 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.293321.379510
LEAShoots from the seedlings (10 cm shoot stage)00.5527290.8839660
INF1Young developing inflorescences (5mm)3.403195.154331.504830
INF2Developing inflorescences (1-1.5 cm)3.791014.489172.587520
ROORoots from the seedlings (10 cm shoot stage)1.715880.9199921.05150
NODDeveloping tillers at six leaf stage, 3rd internode0.5409882.189191.003530
CAR5Developing grain, bracts removed (5 DPA)2.09552.124431.641580
CAR15Developing grain, bracts removed (15 DPA)00.3208520.4684280



CDS Structure of MLOC_53879






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250764.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250764.1CUST_18903_PI427708080NoneNoneNone
MLOC_24724.1NoneAvailableNonecontig_16523 (Not mapped)
MLOC_32527.1NoneAvailableNonecontig_22940 (Not mapped)
MLOC_35928.1NoneAvailableNonecontig_252632 (Mapped)
MLOC_42130.1NoneAvailableNonecontig_2626256 (Not mapped)
MLOC_46449.1NoneAvailableNonecontig_29055 (Not mapped)
MLOC_4788.1NoneAvailableNonecontig_1355068 (Not mapped)
MLOC_49084.1NoneAvailableNonecontig_335269 (Not mapped)
MLOC_53879.1NoneAvailableNonecontig_387091 (Not mapped)
MLOC_62271.1NoneAvailableAvailablecontig_463687 (Mapped)
MLOC_62272.3NoneAvailableNonecontig_463687 (Mapped)
MLOC_68490.1NoneAvailableNonecontig_54866 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----