- Predicted Gene MLOC_53849
MLOC_53849 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.8501 | 20.4766 | 21.0974 | 23.3351 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 29.3999 | 12.1391 | 12.8026 | 16.1958 |
| INF1 | Young developing inflorescences (5mm) | 30.9626 | 39.976 | 37.2102 | 32.8322 |
| INF2 | Developing inflorescences (1-1.5 cm) | 33.9948 | 46.2663 | 38.3212 | 47.3518 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 40.2458 | 45.2323 | 36.0671 | 56.5088 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 47.5737 | 51.5833 | 52.3198 | 172.985 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.1663 | 30.8072 | 28.2627 | 30.9043 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.188 | 9.69103 | 11.1028 | 27.1787 |
CDS Structure of MLOC_53849
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53849.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g50860.1 |
+1 |
3e-130 |
378 |
196/207 (95%) |
13102.m05775 protein ras-related protein, putative, expressed |
| TAIR PP10 |
AT5G62880.1 |
+1 |
2e-113 |
334 |
159/175 (91%) |
| Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-like 10 | chr5:25237236-25238939 FORWARD LENGTH=215 |
