MLOC_53830 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains327.825156.23168.487236.49
LEAShoots from the seedlings (10 cm shoot stage)109.34361.6346108.20291.6943
INF1Young developing inflorescences (5mm)222.736278.18291.864269.377
INF2Developing inflorescences (1-1.5 cm)183.462160.47166.36212.001
ROORoots from the seedlings (10 cm shoot stage)276.908150.069187.525248.612
NODDeveloping tillers at six leaf stage, 3rd internode21.367935.240491.0426166.137
CAR5Developing grain, bracts removed (5 DPA)115.517127.024111.945137.849
CAR15Developing grain, bracts removed (15 DPA)36.463336.224836.669396.4592



CDS Structure of MLOC_53830






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250607.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250607.1CUST_18883_PI427708080NoneNoneNone
MLOC_53830.1NoneAvailableAvailablecontig_38672 (Mapped)
MLOC_72248.1NoneAvailableNonecontig_61307 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----