- Predicted Gene MLOC_53829
MLOC_53829 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.5755 | 6.03152 | 7.2109 | 5.46828 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.60819 | 2.46587 | 2.88835 | 2.52299 |
INF1 | Young developing inflorescences (5mm) | 5.3683 | 7.25631 | 7.1449 | 4.43903 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.51756 | 4.74024 | 5.30468 | 4.24315 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.3086 | 9.56361 | 12.988 | 10.2316 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.52478 | 2.42176 | 6.26142 | 8.42516 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.81215 | 2.86155 | 2.85162 | 2.13863 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.12409 | 1.11235 | 0.735153 | 1.95873 |
CDS Structure of MLOC_53829
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53829.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g13870.3 |
+2 |
2e-157 |
474 |
247/281 (88%) |
13109.m01279 protein lipid phosphatase protein, putative, expressed |
TAIR PP10 |
AT1G15080.1 |
+2 |
5e-118 |
369 |
184/259 (71%) |
| Symbols: ATPAP2, ATLPP2, LPP2 | lipid phosphate phosphatase 2 | chr1:5188080-5189476 FORWARD LENGTH=290 |