- Predicted Gene MLOC_53826
MLOC_53826 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.84151 | 8.6754 | 7.2775 | 7.72672 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.87812 | 7.46695 | 7.16892 | 5.76179 |
| INF1 | Young developing inflorescences (5mm) | 12.7853 | 13.4032 | 12.2765 | 11.1276 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.1997 | 15.7877 | 13.7674 | 17.6398 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.5304 | 9.47775 | 7.08307 | 10.5926 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.08983 | 3.46905 | 3.65859 | 10.7837 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.1996 | 9.41463 | 10.4126 | 9.89381 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.41847 | 2.54354 | 2.5694 | 6.10785 |
CDS Structure of MLOC_53826
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53826.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g45300.1 |
+2 |
0.0 |
1126 |
616/856 (72%) |
13103.m04879 protein transposon protein, putative, unclassified, expressed |
| TAIR PP10 |
AT4G38180.1 |
+2 |
3e-160 |
495 |
278/653 (43%) |
| Symbols: FRS5 | FAR1-related sequence 5 | chr4:17906702-17909404 REVERSE LENGTH=788 |