MLOC_53817 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5711640.7280340.4967560.601717
LEAShoots from the seedlings (10 cm shoot stage)2.031957.635577.203824.15409
INF1Young developing inflorescences (5mm)0.0321190.038263500.0331034
INF2Developing inflorescences (1-1.5 cm)0.0172697000.0217612
ROORoots from the seedlings (10 cm shoot stage)3.589872.378472.584732.46699
NODDeveloping tillers at six leaf stage, 3rd internode0.01329870.08560860.6801760.581492
CAR5Developing grain, bracts removed (5 DPA)0.399180.5111460.5527120.475018
CAR15Developing grain, bracts removed (15 DPA)0.2705630.4758830.2633630.896766



CDS Structure of MLOC_53817






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK357019
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357019CUST_23976_PI427708080NoneNoneNone
MLOC_53817.1NoneAvailableAvailablecontig_38661 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----