MLOC_53813 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.037631.886942.590011.95523
LEAShoots from the seedlings (10 cm shoot stage)3.634850.3145091.483111.4203
INF1Young developing inflorescences (5mm)3.999934.171134.538243.02027
INF2Developing inflorescences (1-1.5 cm)3.271863.227933.142762.88773
ROORoots from the seedlings (10 cm shoot stage)8.969394.47828.375075.06905
NODDeveloping tillers at six leaf stage, 3rd internode0.3488550.3244770.8107790.926735
CAR5Developing grain, bracts removed (5 DPA)5.708695.093556.348274.36701
CAR15Developing grain, bracts removed (15 DPA)0.4635750.2461650.7117320.918092



CDS Structure of MLOC_53813






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK353730
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353730CUST_19259_PI427708080NoneNoneNone
MLOC_49929.1NoneAvailableNonecontig_351060 (Not mapped)
MLOC_53813.1NoneAvailableAvailablecontig_38656 (Mapped)
MLOC_64723.1NoneAvailableNonecontig_49241 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----