- Predicted Gene MLOC_53798
MLOC_53798 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 124.979 | 95.6027 | 93.8885 | 101.21 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 59.117 | 48.0389 | 61.4046 | 44.5674 |
| INF1 | Young developing inflorescences (5mm) | 101.974 | 114.22 | 109.163 | 94.7725 |
| INF2 | Developing inflorescences (1-1.5 cm) | 93.3783 | 98.6828 | 98.813 | 107.633 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 161.168 | 107.444 | 93.4296 | 121.635 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 64.775 | 70.8138 | 78.319 | 194.684 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 105.326 | 120.169 | 103.112 | 108.751 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 26.379 | 25.6519 | 21.8709 | 61.7775 |
CDS Structure of MLOC_53798
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53798.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g48930.1 |
+1 |
1e-123 |
359 |
178/200 (89%) |
13103.m05287 protein peptidase, T1 family, putative, expressed |
| TAIR PP10 |
AT4G14800.1 |
+1 |
6e-105 |
310 |
150/193 (78%) |
| Symbols: PBD2 | 20S proteasome beta subunit D2 | chr4:8500398-8502058 FORWARD LENGTH=199 |