- Predicted Gene MLOC_53797
MLOC_53797 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.22941 | 15.8071 | 13.5531 | 11.8018 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.6462 | 18.4105 | 15.5407 | 12.8934 |
| INF1 | Young developing inflorescences (5mm) | 10.4741 | 10.0941 | 7.95193 | 7.38217 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.60735 | 9.98309 | 10.2623 | 9.79876 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.52503 | 14.2579 | 11.6423 | 13.7084 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.0735 | 10.8859 | 9.12175 | 31.7477 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.5623 | 16.4792 | 17.0508 | 14.6863 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.22242 | 8.79593 | 7.81854 | 17.988 |
CDS Structure of MLOC_53797
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53797.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g48940.1 |
+2 |
0.0 |
1136 |
651/716 (91%) |
13103.m05289 protein chloride channel protein CLC-d, putative, expressed |
| TAIR PP10 |
AT5G26240.1 |
+2 |
0.0 |
1048 |
590/754 (78%) |
| Symbols: CLC-D, ATCLC-D | chloride channel D | chr5:9189622-9194347 FORWARD LENGTH=792 |