MLOC_5375 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.236103 | 0 | 0 | 0.223189 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.112519 | 0 | 0 | 0.108818 |
| INF1 | Young developing inflorescences (5mm) | 1.05546 | 0.579582 | 1.01254 | 0.791672 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.30131 | 5.58114 | 7.2387 | 7.81078 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.100936 | 0.0417149 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0516055 | 0.0096298 | 0.0493495 | 0.0612382 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 50.3987 | 55.1357 | 56.4673 | 59.6725 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.17743 | 9.09618 | 7.70722 | 19.4652 |
CDS Structure of MLOC_5375
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5375.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g10504.3 |
-2 |
4e-128 |
377 |
215/271 (79%) |
13101.m01137 protein OsMADS3 - MADS-box family gene with MIKCc type-box, expressed |
| TAIR PP10 |
AT4G18960.1 |
-2 |
1e-92 |
284 |
141/211 (67%) |
| Symbols: AG | K-box region and MADS-box transcription factor family protein | chr4:10383917-10388272 FORWARD LENGTH=252 |
