- Predicted Gene MLOC_53738
MLOC_53738 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 50.1984 | 79.9335 | 76.3902 | 65.2365 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 33.2154 | 14.5076 | 12.5894 | 16.8316 |
| INF1 | Young developing inflorescences (5mm) | 58.6561 | 55.6198 | 50.0113 | 44.7678 |
| INF2 | Developing inflorescences (1-1.5 cm) | 53.002 | 50.9295 | 51.2919 | 53.134 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 34.0805 | 48.5906 | 34.8253 | 49.2954 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 24.5221 | 31.7679 | 16.0525 | 87.572 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 115.865 | 107.218 | 103.157 | 98.1681 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.9735 | 10.0835 | 12.6222 | 25.674 |
CDS Structure of MLOC_53738
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53738.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g37590.1 |
+3 |
0.0 |
1059 |
555/753 (74%) |
13102.m04114 protein glycerophosphoryl diester phosphodiesterase family protein, putative, expressed |
| TAIR PP10 |
AT5G55480.1 |
+3 |
0.0 |
695 |
376/714 (53%) |
| Symbols: SVL1 | SHV3-like 1 | chr5:22474277-22477819 FORWARD LENGTH=766 |
