MLOC_53731 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.109840.0552694
LEAShoots from the seedlings (10 cm shoot stage)0.39496400.2338750.278832
INF1Young developing inflorescences (5mm)0.07007090.07326040.1769460.0909989
INF2Developing inflorescences (1-1.5 cm)00.056833200.0711004
ROORoots from the seedlings (10 cm shoot stage)0.1416010.4756430.7141680.433724
NODDeveloping tillers at six leaf stage, 3rd internode00.0099673300.0710327
CAR5Developing grain, bracts removed (5 DPA)000.0798340.0516689
CAR15Developing grain, bracts removed (15 DPA)0.07869920.3269250.115820.318979



CDS Structure of MLOC_53731






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53731.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53731.1CUST_7551_PI427708083AvailableAvailablecontig_38589 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g21230.1 -1 2e-17 64 33/76 (43%) 13105.m02247 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----