MLOC_53689 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.958362.396992.097522.34989
LEAShoots from the seedlings (10 cm shoot stage)2.614611.675241.916671.59088
INF1Young developing inflorescences (5mm)5.526796.617875.935854.045
INF2Developing inflorescences (1-1.5 cm)7.54557.068459.583926.85742
ROORoots from the seedlings (10 cm shoot stage)2.201592.476752.295282.3783
NODDeveloping tillers at six leaf stage, 3rd internode1.335761.795232.681525.75402
CAR5Developing grain, bracts removed (5 DPA)5.231743.615964.672153.43712
CAR15Developing grain, bracts removed (15 DPA)0.7777150.7153090.698761.32436



CDS Structure of MLOC_53689






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53689.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53689.1CUST_17734_PI427708080AvailableAvailablecontig_385588 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g13150.1 +2 9e-13 71 46/146 (32%) 13104.m01206 protein OsFBX125 - F-box domain containing protein, expressed
TAIR PP10None-----