MLOC_53650 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7458440.3894250.4783750.538678
LEAShoots from the seedlings (10 cm shoot stage)0.2292750.021656200.106714
INF1Young developing inflorescences (5mm)3.190493.992313.799713.39084
INF2Developing inflorescences (1-1.5 cm)4.665975.007245.37315.73913
ROORoots from the seedlings (10 cm shoot stage)0.5991020.4864250.8531640.645599
NODDeveloping tillers at six leaf stage, 3rd internode0.05274150.01759960.08584390.0802251
CAR5Developing grain, bracts removed (5 DPA)0.2803850.232560.3294560.283471
CAR15Developing grain, bracts removed (15 DPA)0.1816180.0772620.1695970.362589



CDS Structure of MLOC_53650






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53650.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53650.2NoneAvailableAvailablecontig_38535 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g51740.1 +2 5e-140 456 312/493 (63%) 13105.m05593 protein receptor protein kinase CLAVATA1 precursor, putative, expressed
TAIR PP10 AT4G20270.1 +2 3e-123 409 249/474 (53%) | Symbols: BAM3 | Leucine-rich receptor-like protein kinase family protein | chr4:10949822-10952924 FORWARD LENGTH=992