- Predicted Gene MLOC_53633
MLOC_53633 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.877416 | 1.28919 | 0.584695 | 1.03961 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.85096 | 2.3639 | 2.2395 | 1.63681 |
| INF1 | Young developing inflorescences (5mm) | 1.41821 | 1.83154 | 1.72708 | 1.54699 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.84477 | 1.66733 | 1.3393 | 2.02633 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.22477 | 0.615431 | 1.58939 | 0.940435 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.31166 | 1.13583 | 1.89809 | 2.98269 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.636462 | 0.776202 | 0.719478 | 0.812287 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.202981 | 0.146103 | 0.177249 | 0.489774 |
CDS Structure of MLOC_53633
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53633.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g28370.2 |
+2 |
1e-51 |
171 |
98/124 (79%) |
13105.m02921 protein expressed protein |
| TAIR PP10 |
AT5G58575.1 |
+2 |
2e-28 |
108 |
64/122 (52%) |
CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23674399-23675224 FORWARD LENGTH=181 |