MLOC_53624 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.143258.6534412.80547.50549
LEAShoots from the seedlings (10 cm shoot stage)12.399110.021312.71678.22384
INF1Young developing inflorescences (5mm)23.620733.172630.29218.6305
INF2Developing inflorescences (1-1.5 cm)21.057136.544834.337527.7407
ROORoots from the seedlings (10 cm shoot stage)10.42412.79677.1797311.3023
NODDeveloping tillers at six leaf stage, 3rd internode15.581920.802318.454550.9895
CAR5Developing grain, bracts removed (5 DPA)20.11419.265617.45215.2084
CAR15Developing grain, bracts removed (15 DPA)10.70988.197928.407317.5133



CDS Structure of MLOC_53624






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53624.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53624.2CUST_13098_PI427708080AvailableAvailablecontig_385191 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g36220.1 +3 2e-20 87 50/108 (46%) 13106.m03740 protein OsFBX198 - F-box domain containing protein, expressed
TAIR PP10None-----