- Predicted Gene MLOC_53599
MLOC_53599 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53599_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53599_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 168.584 | 127.67 | 138.372 | 102.295 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 107.903 | 74.2304 | 66.7495 | 54.3084 |
INF1 | Young developing inflorescences (5mm) | 117.088 | 139.072 | 113.306 | 72.3622 |
INF2 | Developing inflorescences (1-1.5 cm) | 82.28 | 84.3978 | 69.3016 | 65.9792 |
ROO | Roots from the seedlings (10 cm shoot stage) | 139.203 | 106.103 | 117.767 | 92.7001 |
NOD | Developing tillers at six leaf stage, 3rd internode | 104.202 | 56.7573 | 38.8909 | 121.596 |
CAR5 | Developing grain, bracts removed (5 DPA) | 103.439 | 105.935 | 105.731 | 71.8509 |
CAR15 | Developing grain, bracts removed (15 DPA) | 20.4838 | 15.6494 | 21.0917 | 29.7919 |
CDS Structure of MLOC_53599
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53599.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g21970.1 |
+1 |
5e-27 |
105 |
53/54 (98%) |
13102.m02462 protein 26S protease regulatory subunit 6B, putative, expressed |
TAIR PP10 |
AT5G58290.1 |
+1 |
2e-27 |
105 |
53/54 (98%) |
| Symbols: RPT3 | regulatory particle triple-A ATPase 3 | chr5:23569155-23571116 FORWARD LENGTH=408 |