- Predicted Gene MLOC_53587
MLOC_53587 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0758628 | 0.0715601 | 0.0461666 | 0.0568186 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0704411 | 0.113697 | 0.0257236 | 0.0454754 |
| INF1 | Young developing inflorescences (5mm) | 1.19602 | 0.691714 | 1.40275 | 0.831838 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.3673 | 6.67262 | 8.03438 | 9.05778 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0158957 | 0 | 0.0096365 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.00578247 | 0.00967254 | 0.0138079 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0495384 | 0.012588 | 0.0149391 | 0.0206779 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0604447 | 0.0812261 | 0.107525 | 0.148611 |
CDS Structure of MLOC_53587
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53587.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g44750.1 |
-2 |
3e-83 |
207 |
107/216 (50%) |
13111.m04462 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT1G24260.3 |
+3 |
2e-38 |
147 |
76/113 (67%) |
| Symbols: SEP3 | K-box region and MADS-box transcription factor family protein | chr1:8593790-8595862 REVERSE LENGTH=237 |