- Predicted Gene MLOC_53551
MLOC_53551 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.11776 | 2.64226 | 2.88463 | 2.42874 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.48854 | 0.316217 | 0.146323 | 0.598794 |
| INF1 | Young developing inflorescences (5mm) | 10.2591 | 11.5517 | 10.7747 | 8.44516 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.7611 | 8.80487 | 8.38306 | 9.06519 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.87269 | 2.2107 | 1.63038 | 2.26754 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0456742 | 0.0205792 | 0.00692704 | 0.0637261 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.42709 | 1.19563 | 1.56303 | 1.26439 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.426214 | 0.51348 | 0.39011 | 0.952711 |
CDS Structure of MLOC_53551
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53551.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g01200.1 |
-1 |
0.0 |
960 |
512/643 (80%) |
13103.m00024 protein SNF2 family N-terminal domain containing protein, expressed |
| TAIR PP10 |
AT2G44980.2 |
-1 |
0.0 |
695 |
375/633 (59%) |
SNF2 domain-containing protein / helicase domain-containing protein | chr2:18552343-18556669 REVERSE LENGTH=877 |