- Predicted Gene MLOC_53533
MLOC_53533 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53533_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53533_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.35312 | 9.62373 | 8.40673 | 7.91844 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.2581 | 13.471 | 11.1409 | 11.8233 |
INF1 | Young developing inflorescences (5mm) | 27.6206 | 27.0819 | 23.8378 | 21.5918 |
INF2 | Developing inflorescences (1-1.5 cm) | 21.6972 | 23.2013 | 21.09 | 23.5688 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.02648 | 10.7055 | 8.01169 | 11.3453 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.32392 | 2.83955 | 6.71063 | 11.245 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.3776 | 11.6909 | 12.4119 | 11.0337 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.78431 | 3.13919 | 3.09249 | 6.46533 |
CDS Structure of MLOC_53533
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53533.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g07840.1 |
-2 |
0.0 |
1230 |
645/876 (74%) |
13108.m00805 protein PolI-like DNA polymerase, putative, expressed |
TAIR PP10 |
AT1G50840.1 |
-2 |
0.0 |
1019 |
526/814 (65%) |
| Symbols: POLGAMMA2 | polymerase gamma 2 | chr1:18839277-18844313 FORWARD LENGTH=1050 |