- Predicted Gene MLOC_53532
MLOC_53532 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53532_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53532_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0 | 0.181242 | 0.118839 | 0.107253 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0379521 | 0.141425 | 0.0618802 | 0.0537365 |
INF1 | Young developing inflorescences (5mm) | 0.0379268 | 0.0977404 | 0.116444 | 0.0624221 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0746622 | 0.0945278 | 0.0477525 | 0.0811654 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.584662 | 0.0366689 | 0.0795918 | 0.0668838 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.315457 | 0.127709 | 0.123001 | 0.312192 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.141287 | 0.0528784 | 0.0982924 | 0.0870598 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0240447 | 0 | 0.0190228 |
CDS Structure of MLOC_53532
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53532.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g54510.1 |
+3 |
8e-144 |
437 |
242/347 (70%) |
13104.m05639 protein mTERF family protein, expressed |
TAIR PP10 |
AT5G07900.1 |
+3 |
2e-33 |
134 |
92/333 (28%) |
Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405 |