MLOC_53530 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.18389.9813912.36940
LEAShoots from the seedlings (10 cm shoot stage)8.558222.890146.086470
INF1Young developing inflorescences (5mm)10.229910.426710.7040
INF2Developing inflorescences (1-1.5 cm)6.290937.526167.056450
ROORoots from the seedlings (10 cm shoot stage)8.085746.146055.72310
NODDeveloping tillers at six leaf stage, 3rd internode3.878012.123252.285380
CAR5Developing grain, bracts removed (5 DPA)6.545394.352387.172190
CAR15Developing grain, bracts removed (15 DPA)2.570181.206491.756560



CDS Structure of MLOC_53530






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370728
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370728CUST_22006_PI427708080NoneNoneNone
MLOC_53530.1NoneAvailableNonecontig_38440 (Mapped)
MLOC_58517.1NoneAvailableAvailablecontig_42741 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----