- Predicted Gene MLOC_53511
MLOC_53511 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53511_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53511_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.6717 | 5.71467 | 6.31495 | 7.42841 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.0212 | 1.56301 | 2.12047 | 2.89819 |
INF1 | Young developing inflorescences (5mm) | 19.5746 | 22.6477 | 26.6706 | 22.7707 |
INF2 | Developing inflorescences (1-1.5 cm) | 38.6211 | 35.8191 | 35.4087 | 47.0759 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.36916 | 4.59062 | 5.96985 | 6.75143 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.84044 | 12.0891 | 11.2279 | 43.6823 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.9857 | 7.2104 | 6.7621 | 8.54587 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.01801 | 1.64852 | 1.98636 | 5.27548 |
CDS Structure of MLOC_53511
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53511.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g02500.1 |
+2 |
0.0 |
751 |
420/511 (82%) |
13102.m00190 protein remorin family protein, putative, expressed |
TAIR PP10 |
AT2G02170.2 |
+2 |
1e-109 |
350 |
241/520 (46%) |
Remorin family protein | chr2:556595-558610 REVERSE LENGTH=486 |