MLOC_53508 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains021.243911.94940
LEAShoots from the seedlings (10 cm shoot stage)8.697745.772646.063170
INF1Young developing inflorescences (5mm)25.454921.42919.68810
INF2Developing inflorescences (1-1.5 cm)6.5025617.805815.60770
ROORoots from the seedlings (10 cm shoot stage)015.83618.010610
NODDeveloping tillers at six leaf stage, 3rd internode10.137106.149240
CAR5Developing grain, bracts removed (5 DPA)13.276415.595421.84540
CAR15Developing grain, bracts removed (15 DPA)3.105953.638942.476980



CDS Structure of MLOC_53508






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363899
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363899CUST_20801_PI427708080NoneNoneNone
MLOC_53508.1NoneAvailableNonecontig_38423 (Mapped)
MLOC_72774.1NoneAvailableAvailablecontig_6234 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----