MLOC_53502 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.65687.7779210.60778.79085
LEAShoots from the seedlings (10 cm shoot stage)8.9170910.899214.45718.92465
INF1Young developing inflorescences (5mm)6.649616.820037.055735.17171
INF2Developing inflorescences (1-1.5 cm)6.671175.62697.694136.46173
ROORoots from the seedlings (10 cm shoot stage)8.004038.51326.624739.19602
NODDeveloping tillers at six leaf stage, 3rd internode5.114856.535178.038620.0712
CAR5Developing grain, bracts removed (5 DPA)5.064184.354653.564243.83247
CAR15Developing grain, bracts removed (15 DPA)0.7639990.7906671.355631.81869



CDS Structure of MLOC_53502






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365754
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365754CUST_24947_PI427708080NoneNoneNone
MLOC_15318.1NoneAvailableNonecontig_1570403 (Mapped)
MLOC_28246.1NoneAvailableNonecontig_190328 (Not mapped)
MLOC_53502.1NoneAvailableAvailablecontig_38420 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----