- Predicted Gene MLOC_53501
MLOC_53501 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.564734 | 0.729474 | 0.611496 | 0.622229 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.703749 | 1.0798 | 1.16544 | 0.763894 |
| INF1 | Young developing inflorescences (5mm) | 0.693884 | 0.396634 | 0.388092 | 0.437521 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.747848 | 0.885641 | 0.507639 | 0.837787 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.589453 | 0.418043 | 0.339841 | 0.452956 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.285586 | 0.564002 | 0.555551 | 1.65653 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.356352 | 0.457164 | 0.596934 | 0.427162 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0985131 | 0.220256 | 0.17967 | 0.363926 |
CDS Structure of MLOC_53501
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53501.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g03770.1 |
+1 |
2e-19 |
94 |
46/54 (85%) |
13106.m00319 protein ABC transporter, ATP-binding protein, putative, expressed |
| TAIR PP10 |
AT5G58270.1 |
+1 |
1e-17 |
87 |
41/54 (76%) |
| Symbols: STA1, ATATM3, ATM3 | ABC transporter of the mitochondrion 3 | chr5:23562168-23567040 FORWARD LENGTH=728 |