MLOC_53495 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.359113.33114.339814.569
LEAShoots from the seedlings (10 cm shoot stage)19.713516.151722.504714.8473
INF1Young developing inflorescences (5mm)5.463867.366198.553484.79695
INF2Developing inflorescences (1-1.5 cm)6.051925.124786.240115.38704
ROORoots from the seedlings (10 cm shoot stage)29.899122.906117.439224.4041
NODDeveloping tillers at six leaf stage, 3rd internode23.113921.157321.856163.7377
CAR5Developing grain, bracts removed (5 DPA)11.446711.4229.892868.86842
CAR15Developing grain, bracts removed (15 DPA)5.328666.210813.9117110.5195



CDS Structure of MLOC_53495






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53495.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53495.1CUST_7526_PI427708083AvailableAvailablecontig_38413 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g02850.1 -2 4e-11 64 36/64 (56%) 13103.m00264 protein tobamovirus multiplication protein, putative, expressed
TAIR PP10None-----