MLOC_53487 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains58.047646.845855.98940
LEAShoots from the seedlings (10 cm shoot stage)21.512812.493711.4270
INF1Young developing inflorescences (5mm)26.115529.457431.95430
INF2Developing inflorescences (1-1.5 cm)25.325518.109616.78220
ROORoots from the seedlings (10 cm shoot stage)52.641622.217838.95840
NODDeveloping tillers at six leaf stage, 3rd internode23.374310.335213.46920
CAR5Developing grain, bracts removed (5 DPA)15.949116.994619.65510
CAR15Developing grain, bracts removed (15 DPA)4.978313.011375.014870



CDS Structure of MLOC_53487






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK360070
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360070CUST_20168_PI427708080NoneNoneNone
MLOC_53487.1NoneAvailableNonecontig_38401 (Mapped)
MLOC_58791.1NoneAvailableAvailablecontig_43000 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----