- Predicted Gene MLOC_53473
MLOC_53473 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53473_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53473_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 120.151 | 84.4691 | 92.7843 | 95.2864 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 78.1962 | 107.748 | 78.7431 | 71.9262 |
INF1 | Young developing inflorescences (5mm) | 26.6042 | 26.7653 | 32.4204 | 26.3141 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.6157 | 19.3294 | 19.5999 | 22.7003 |
ROO | Roots from the seedlings (10 cm shoot stage) | 167.525 | 70.0038 | 102.868 | 95.3911 |
NOD | Developing tillers at six leaf stage, 3rd internode | 117.623 | 109.165 | 129.557 | 319.829 |
CAR5 | Developing grain, bracts removed (5 DPA) | 38.6319 | 44.6685 | 41.2782 | 44.3682 |
CAR15 | Developing grain, bracts removed (15 DPA) | 14.9426 | 13.8343 | 13.2604 | 36.3541 |
CDS Structure of MLOC_53473
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53473.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g12830.1 |
+1 |
9e-157 |
452 |
262/316 (83%) |
13101.m01401 protein erythronate-4-phosphate dehydrogenase domain containing protein, expressed |
TAIR PP10 |
AT1G79870.1 |
+1 |
6e-125 |
370 |
218/316 (69%) |
D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr1:30044794-30045851 FORWARD LENGTH=313 |