- Predicted Gene MLOC_53471
MLOC_53471 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53471_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53471_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.44062 | 1.03407 | 0.961225 | 1.26311 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.942117 | 0.463737 | 0.227147 | 0.490968 |
INF1 | Young developing inflorescences (5mm) | 1.08733 | 1.00451 | 1.15424 | 1.04831 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.47178 | 1.4315 | 0.939361 | 1.71089 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.832568 | 0.344136 | 0.717212 | 0.62247 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.0872 | 5.64492 | 4.9695 | 20.7322 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.421488 | 0.481053 | 0.549436 | 0.580609 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.187414 | 0.15366 | 0.15634 | 0.464799 |
CDS Structure of MLOC_53471
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53471.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g48640.1 |
+3 |
0.0 |
709 |
384/533 (72%) |
13105.m05183 protein ATROPGEF7/ROPGEF7, putative, expressed |
TAIR PP10 |
AT4G13240.1 |
+3 |
3e-167 |
496 |
257/452 (57%) |
| Symbols: ATROPGEF9, ROPGEF9 | RHO guanyl-nucleotide exchange factor 9 | chr4:7680153-7682414 FORWARD LENGTH=517 |